Software and Download
GitLab
All information regarding the installation and usage of the TreeMig R package is available on GitLab. On the Wiki page, you will find detailed information about the various functions and specifications for the input data.
To install the latest version of TreeMig in R, use the following R code:
#Packages required for TreeMig installation
require("remotes")
#Installation of the newest Version of TreeMig from GitLab
remotes::install_gitlab(repo = "boehmd/treemig@main", host="https://gitlabext.wsl.ch", force=TRUE, upgrade = "never")
#Running the GUI
TreeMig::runTreeMigShiny(port=5704)
Tutorial and Example Data
We also provide a tutorial with sample data from Switzerland. The required data can be downloaded from here.